CDS
| Accession Number | TCMCG007C35404 |
| gbkey | CDS |
| Protein Id | XP_009147871.1 |
| Location | complement(join(2186378..2186493,2186583..2186646,2186752..2186830,2186963..2187193,2187287..2187373,2187473..2187732,2187820..2187923,2188072..2188147,2188230..2188409,2188529..2188627,2188727..2188810,2189104..2189226,2189306..2189398,2189507..2189584,2189716..2189838,2189929..2190069,2190152..2190202,2190287..2190412,2190498..2190575,2190671..2190747,2190827..2190917)) |
| Gene | LOC103871382 |
| GeneID | 103871382 |
| Organism | Brassica rapa |
Protein
| Length | 786aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009149623.3 |
| Definition | pre-rRNA-processing protein TSR1 homolog [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | pre-rRNA-processing protein TSR1 homolog |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGCGCTCTCGAGTTCAAGTCAATAAGGCTCACAAGACTCGCTTCTCCTCCAAATCTTCTCGAAATCTCCACAGAACCTCCCTTCAAGATGGCGGCCGGATTGGTAAAGCGGAGGGGAGCCATGTCAAAGGTGCTAGAGCTGCTCGTCTTCAGCGTGGCAAGATGCTCAGAGAGCAGAAGAGAGCAGCGGTTTTGAAGGAGAAGAGAGCTTCAGGAGGATCAACCAGTGCTCCTCGTGTTATCGTCTTGTTTCCTCTTTCTGCTTCTGTGGATTTGAATTCACTTGGTGATGACGTCTTAAAGCTGTTATCTAATGGTGATGGTTCTTGTTCAACAGTTGCATCTTCTGAGTATAAGCTAAGAGCAACTGTGTTGAAGGCGCCTCACGGGGATCTTCTGACATGCATGGAAATGGCTAAGGTTGCTGATTTGATGGCTTTTGTTGTATCTGCAAACTCCCCATGGGAAGAGAATGTATCTAGCTTCATAGACTCATTCGGAAGTCAGTGCCTTTCTGTGCTTAGATCTATTGGTCTACCTAGCACCACTGTGTTGATTCGTGATTTACCCAGTGAGTTGAAAAAGAAAAATGAGCTGAAAAAGATGTGTGCCTCGCAACTGGCTTCTGAATTTCCTGAGGATTGTAAGTTTTATCCAGCAGATACCAGAGATGAGTTGCATAAGTTCATGTGGTTATTCAAGGCACAAAGGCTTACTGTGCCTCATTGGAGAACTCAACGGCCATATGTTGTGACTGAGAAGGTTGGGATGGTAGTAGCTAATGAAAGCTCAGGAAAATGCACTCTACTTCTCTCTGGTTACTTGCGTGCTCGCAAACTATCTGTAAATCAGCTGGTCCATGTTTCTGGCGTCGGTGATTTTCAGCTCTCAGAACTTGAAGTCCTGAAGGACCCATTTCCATTGAATGAAAGGAAAAAACAGAATTCCATGGAACTGGATGATTCACATGATGAAGAGGTATTGAGGTCTCTGCATCCTGATCCCATGAAACAAGAGCCTTTAGTAGCTGAAAACACTCCAGATCCTTTAGCAGGGGAACAGACATGGCCAACTGAGGCAGAGATGGCTGAGGCGGACAGAAATCAGAAGCAGGGAAAGCTAAAGAAGAGGACTTTGCCACGAGGGATGTCAGAATATCAGGCTGCTTGGATTGTCGATGAAATAGATGAAGAGGATTCTGATAATGGTGATTCCGATGATGATGGTATGGTGTTGGATAAACAAGAGGATCACTTCTCCAATCAAGACCAAGATTTTGAGGACGATAAAGAAACACTGCGGGATGTGGATAATGAAACTTATAACGACTCCGAGATGATGGATGATGAAAACTTGACAAGGGAGCAGTATGAGGATCAAATGAAGAAAATAAAAGAGGCACATGCCGAGGATGAGGAATTTCCTGATGAAGTAGAGACTCCCATTGATCAGCCTGCAAGAAAACGTTTTGCAAAGTATAGGGGTCTCAAATCCTTCAGAACGTCATCGTGGGATCCAAATGAGTCTCTACCTCAGGACTATGCCAGAATCTTTGCTTTTGATAATCTCGCAAGGACTCAAAAGCTTGTACTCAAGCAAGCCCTGAAGATGGAAGAAGAAAGCAGAGATGATTGTGTACCCACTGGCTCATATGTACGGCTGCATATTAAGGAAGTGCCTCTTGTTGCTGCCTCTAAACTATCCTCCCTTGTGAGCTCGAAACCCGTTATAGCATTTGGGCTTTTACAGCATGAATCCAAGATGTCGGTTCTGCACTTTAGCGTTAAGAAGTATGATGGTTATGAAGATCCTATCAAAACTAAAGAAGAACTTATGTTCCATGTTGGTTTCCGCCAATTCGTTGCAAGACCAGTGTTTTCAACCGACAATTTCAGCTCAGACAAGCACAAGATGGAGCGGTTTCTGCACCCGGGGCGTTTCTCATTGGCTTCAGTATACGGCCCGATATCTTTCCCGTCACTTCCTTTGGTAGTTCTGAAGATTTCTGAAGGGTCGGATGCTCCTGCCGTTGCTGCTCTTGGTTCCTTGAAAAGCATTGAACCCAACAAAATAATCTTAAAGAAGATAATATTAACTGGGTATCCTCAGAGAGTATCAAAGATGAAAGCATCAGTGAGATATATGTTCCATAACCCGGAAGACGTGAGATGGTTTAAGCCTGTAGAAGTGTGGTCTAAATGTGGGCGTCGTGGTCGCGTGAAGGAGCCCGTGGGTACACATGGGGCAATGAAATGCATATTCAATGGAGTGGTGCAGCAACATGACGTCGTGTGCATGAACTTGTACAAGCGTGCTTATCCCAAATGGCCCGAGCGTATGTACCCACAGCTTCTCTAA |
| Protein: MGRSRVQVNKAHKTRFSSKSSRNLHRTSLQDGGRIGKAEGSHVKGARAARLQRGKMLREQKRAAVLKEKRASGGSTSAPRVIVLFPLSASVDLNSLGDDVLKLLSNGDGSCSTVASSEYKLRATVLKAPHGDLLTCMEMAKVADLMAFVVSANSPWEENVSSFIDSFGSQCLSVLRSIGLPSTTVLIRDLPSELKKKNELKKMCASQLASEFPEDCKFYPADTRDELHKFMWLFKAQRLTVPHWRTQRPYVVTEKVGMVVANESSGKCTLLLSGYLRARKLSVNQLVHVSGVGDFQLSELEVLKDPFPLNERKKQNSMELDDSHDEEVLRSLHPDPMKQEPLVAENTPDPLAGEQTWPTEAEMAEADRNQKQGKLKKRTLPRGMSEYQAAWIVDEIDEEDSDNGDSDDDGMVLDKQEDHFSNQDQDFEDDKETLRDVDNETYNDSEMMDDENLTREQYEDQMKKIKEAHAEDEEFPDEVETPIDQPARKRFAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNLARTQKLVLKQALKMEEESRDDCVPTGSYVRLHIKEVPLVAASKLSSLVSSKPVIAFGLLQHESKMSVLHFSVKKYDGYEDPIKTKEELMFHVGFRQFVARPVFSTDNFSSDKHKMERFLHPGRFSLASVYGPISFPSLPLVVLKISEGSDAPAVAALGSLKSIEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVRWFKPVEVWSKCGRRGRVKEPVGTHGAMKCIFNGVVQQHDVVCMNLYKRAYPKWPERMYPQLL |